© Kai Dührkop and Marvin Meusel and Markus Fleischauer and Marcus Ludwig.
http://bio.informatik.uni-jena.de/software/sirius/
SIRIUS is licenced under the terms of the GNU General Public License (GPL) version 3 as published by the Free Software Foundation.
Kai Dührkop and Sebastian Böcker
Fragmentation trees reloaded.
In Proc. of Research in Computational Molecular Biology (RECOMB 2015), volume 9029 of Lect Notes Comput Sci, pages 65-79. 2015. [doi]
Sebastian Böcker, Matthias Letzel, Zsuzsanna Lipták and Anton Pervukhin
SIRIUS: Decomposing isotope patterns for metabolite identification.
Bioinformatics, 25(2):218-224, 2009. [doi]
Sebastian Böcker and Florian Rasche
Towards de novo identification of metabolites by analyzing tandem mass spectra.
Bioinformatics, 24:I49-I55, 2008. Proc. of European Conference on Computational Biology (ECCB 2008). [doi]
Kai Dührkop, Huibin Shen, Marvin Meusel, Juho Rousu and Sebastian Böcker
Searching molecular structure databases with tandem mass spectra using CSI:FingerID.
Proc Natl Acad Sci U S A, 112(41):12580-12585, 2015. [doi]
Huibin Shen, Kai Dührkop, Sebastian Böcker and Juho Rousu
Metabolite Identification through Multiple Kernel Learning on Fragmentation Trees.
Bioinformatics, 30(12):i157-i164, 2014. Proc. of Intelligent Systems for Molecular Biology (ISMB 2014). [doi]
Markus Heinonen, Huibin Shen, Nicola Zamboni and Juho Rousu
Metabolite identification and molecular fingerprint prediction through machine learning
Bioinformatics (2012) 28 (18): 2333-2341.Proc. of European Conference on Computational Biology (ECCB 2012). [doi]