Currents in Bioinformatics

  • Letztmalig/aktuell im WiSe 2025/26
  • Nächste Instanz geplant im SoSe 2026
  • Seminarleitung: Roberto Herrero Pérez, Andrés Rogelio Martínez Bilesio, Fleming Kretschmer
  • Seminarort: erste beiden Termine August-Bebel-Straße 4, SR 102, danach Campus Inselplatz SR 2009
  • Dienstag 16:15-17:45 Uhr
  • Beginn: 14.10.25
  • Weitere Infos im Moodle
14.10.25 Organisatorisches, Wie liest man ein Paper?
25.11.25 Vorstellung Paper 4
2.12.25 Vorstellung Paper 2
9.12.25 Vorstellung Paper 3
16.12.25 Vorstellung Paper 1
6.1.26 Vorstellung Paper 6
17.3.26 Abgabe Deadline für Abstracts (siehe Template unten!)

“Live” Paper

Moodle

Papers to present (choose one!)

  1. Taken (16.12.): Efficient and accurate search in petabase-scale sequence repositories: https://doi.org/10.1038/s41586-025-09603-w
  2. Taken (2.12.): Generative AI for navigating synthesizable chemical space: https://doi.org/10.1073/pnas.2415665122
  3. Taken (9.12.): Data splitting to avoid information leakage with DataSAIL: https://doi.org/10.1038/s41467-025-58606-8
  4. Taken (25.11.): Single-cell metabolome and RNA-seq multiplexing on single plant cells: https://doi.org/10.1073/pnas.2512828122
  5. Covariation MS uncovers a protein that controls cysteine catabolism: https://doi.org/10.1038/s41586-025-09535-5
  6. Taken (6.1.26): PeakClimber: A software tool for the accurate quantification of complex HPLC chromatograms: https://doi.org/10.1016/j.jchromb.2025.124721
  7. Deep-learning-based virtual screening of antibacterial compounds: https://doi.org/10.1038/s41587-025-02814-6
  8. When Artifacts Masquerade as Discovery: A Case Study Revealing Hidden Laboratory Errors in Lipidomics Data with Biologically Apparently Plausible Results: https://dx.doi.org/10.2139/ssrn.5370709

From last semester

  1. https://doi.org/10.1038/s41587-024-02524-5
  2. https://doi.org/10.1101/2025.04.02.646906
  3. https://www.nature.com/articles/s42255-025-01283-0
  4. https://doi.org/10.1101/2025.04.07.647691
  5. https://doi.org/10.1038/s41586-025-08869-4 and/or https://doi.org/10.1038/s41586-025-08866-7
  6. https://doi.org/10.1021/acs.analchem.5c00737
  7. https://doi.org/10.1038/s41592-025-02646-x

Material