Franziskas Antrag an die Carl Zeiss Stiftung im Rahmen des Nachwuchsförderprogramms 2014 wurde bewilligt. Zum Thema “Lücken im Kraftwerk der Zukunft” werden wir zukünftig zusammen mit Manja Marz den Hell/Dunkel-Zyklus bei Cyanobakterien mittels kombinierter Metabolom- und Transkriptomanalyse untersuchen.
News
Tag der Forschung: Die Digitale Gesellschaft
Am Mittwoch 11. Juni 2014 von 14 bis 21 Uhr findet im Foyer der Carl-Zeiss-Straße 3 sowie den angrenzenden Hörsälen der diesjährige Tag der Forschung zum Thema “Die Digitale Gesellschaft” statt. Gezeigt werden unter anderem Elektrofahrzeuge, Quadrocopter, 3D-Drucker sowie Demos aus den Bereichen Computer Vision und Biodiversität. Die Bioinformatik wird dort ebenfalls vertreten sein. Mehr Informationen gibt es hier.
Meet Sebastian at Trends in Metabolomics in Frankfurt
Sebastian will give a talk at the Dechema meeting “Trends in Metabolomics” in Frankfurt, June 4-5, 2014. Title of the talk is “Searching PubChem with MS2 data: Teaming fragmentation trees and molecular fingerprint prediction”.
Meet Sebastian at Metabolomics 2014
Sebastian will give a talk at the Metabolomics 2014 meeting in Tsuruoka, Japan.
We co-author a paper at ISMB
Our joint paper with Huibin Shen and Juho Rousu (Aalto University, Helsinki, Finland), “Metabolite Identification through Multiple Kernel Learning on Fragmentation Trees”, will be presented by Huibin at the Intelligent Systems for Molecular Biology (ISMB 2014) conference in Boston.
Studieninformationsseite für Schüler
Unter http://www.uni-jena.de/bioinformatik finden sich Informationen zum Studium der Bioinformatik in Jena. Alle Studieninteressierten mögen dort vorbei schauen!
Shonan seminar on exact algorithms for bioinformatics research
Sebastian is one of the organizers of the Shonan seminar “Towards the ground truth: Exact algorithms for bioinformatics research“. The seminar will take place in Tokyo, Japan from March 16th to March 20th. If you are interested in participating, please contact one of the organizers.
Lehrveranstaltungen von Ivo Große
Ivo Große von der Universität Halle wird uns am 9. und 16. Januar besuchen und zwei Vorlesungen zum Thema Motif Finding und EM-Algorithmus halten – klassische Themen der Bioinformatik, die in Jena leider nicht mehr gelehrt werden.
Die erste Vorlesung findet am Donnerstag dem 9. Januar von 13:00 bis 16:00 Uhr im Seminarraum 113, Carl-Zeiss-Str. 3 statt.
Die zweite Vorlesung findet am Donnerstag dem 16. Januar von 13:00 bis 16:00 im Hörsaal 146, UHG, Fürstengraben 1 statt.
Die beiden Veranstaltungen sind für alle Studierenden der Bioinformatik, insbesondere für alle Master-Studenten interessant. Alle Interessierten sind herzlich eingeladen.
JCB workshop starts today
The Jena Centre for Bioinformatics Workshop “Bioinformatics meets Biodiversity” will be help Mon+Tue 23.-24.09.2013 in the Rosensäle in Jena. Most of our group will be there.
Meet Sebastian at GCB 2013
Sebastian will attend the German Conference in Bioinformatics in Göttingen, Germany. Meet him there on Sep 12, 2013.
Meet Sebastian at WABI 2013
Sebastian will attend the Workshop on Algorithms in Bioinformatics in Sophia Antipolis, France. He will present two papers on “The generalized Robinson-Foulds metric” and “Faster mass decomposition”.
Meet us at ISMB/ECCB in Berlin
Martin, Markus, Franziska, Purva and Kai will attend 21st Annual International Conference on Systems and Molecular Biology in Berlin. We will present three posters (B21, K07, and O064).
Meet Kerstin at Lipari Summer School
Kerstin will attend Lipari School on Bioinformatics and Computational Biology – Computational Network Biology in Lipari, July 13-20, 2013.
Meet us at ASMS 2013
Martin and Kai will attend 61st ASMS Conference on Mass Spectrometry and Allied Topics in Minneapolis, Minnesota. We will present two posters (MP 734 and WP 231).
GCB 2012 is over
We hope that everybody enjoyed the show — we most certainly did! See you next year in Göttingen: 10. – 13. September 2013, see http://www.gcb2013.de/.
GCB 2012 in Jena will start shortly!
Hope to see you all in Jena at the GCB 2012, September 19-22, 2012! The conference features six international invited speakers, about 20 regular and highlight presentations, almost 100 posters and already more than 200 registered attendees. So come and join us for a wonderful conference!
Meet us at ISMB 2012
Franziska, Kerstin, and Sebastian will attend the Intelligent Systems for Molecular Biology (ISMB 2012) conference in Long Beach, California (July 15-17, 2012). Franziska will present a regular paper, Kerstin will present a poster, and Sebastian will present a highlight paper.
Highlights paper at ISMB 2012
We will present a highlights paper on “Identifying the unknowns by aligning fragmentation trees” (Anal. Chem., 2012, in press, doi:10.1021/ac300304u) at the Intelligent Systems for Molecular Biology (ISMB 2012) conference in Long Beach, California. I already mentioned that we are thrilled…
New version of Sirius²
We present the second release of our mass spectrometry software framework Sirius2. With Sirius2 version 1.0 you can now analyze MSn data and load full LCMS runs. Please visit our homepage for more information or download Sirius2 directly here.